Basic Information | |
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Taxon OID | 3300028647 Open in IMG/M |
Scaffold ID | Ga0272412_1259388 Open in IMG/M |
Source Dataset Name | Metatranscriptome of activated sludge microbial communities from WWTP in Nijmegen, Gelderland, Netherland - WWTP Weurt (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 707 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Orthoptera → Caelifera → Acrididea → Acridomorpha → Acridoidea → Acrididae → Cyrtacanthacridinae → Schistocerca → Schistocerca gregaria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Studying Microbial Cell-Cell Associations In A Wide Range Of Aquatic Ecosystems |
Source Dataset Sampling Location | ||||||||
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Location Name | Netherlands: Nijmegen, Gelderland | |||||||
Coordinates | Lat. (o) | 51.82 | Long. (o) | 5.87 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F001616 | Metagenome / Metatranscriptome | 662 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0272412_12593881 | F001616 | GAG | MGGKQSMVGLKMMEAIYPSKSPTVFTDPKLKTILDKEVLKLHLKLDDLEPDEIAVDGDLDADIDRCITMVFQVYDRKKTGSIRKKDAEEFFKDCLELYALRQGKKSSKEILPKNVKMDKALADCVKKMSPSTAPVVTKEEFEKFLNCYDIEEALEPFFSTNGIDIDGNVSYVDTSVFSSAQREGPKLVYRDYPDD |
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