Scaffold Ga0302151_10267959

Overview

Basic Information

• Taxon OID: 3300028562
• Scaffold ID: Ga0302151_10267959
• Source Dataset Name: Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 570
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog → Peat Permafrost Microbial Communities From Stordalen Mire Near Abisko, Sweden

Source Dataset Sampling Location

• Location Name: Sweden: Abisko, Stordalen Mire
• Coordinates
  • Lat. (^o): 68.3532
  • Long. (^o): 19.0477
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003000	Metagenome / Metatranscriptome	514	Y
F069590	Metagenome / Metatranscriptome	123	Y
F083628	Metagenome / Metatranscriptome	112	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0302151_102679591	F069590	N/A	ETEADDLHPGESTQGVVSIRQDLKSPAVVQLVFHDGVKATVVL
Ga0302151_102679592	F003000	N/A	MKANTQLDEMRDRLIEFHLRSPKERIGDVLLRWVEDPLKPRDERGRFRVNPILLLLAIVFALVFGTFLLFSMVQL
Ga0302151_102679593	F083628	N/A	MTAENEYRLGRRAFHQNQDESVAAAIAIVAVLLLAGGSYILASRFHVRSVQLVEGSLYAFFALVAGVSVIW