Basic Information | |
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Taxon OID | 3300028196 Open in IMG/M |
Scaffold ID | Ga0257114_1000243 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 42118 |
Total Scaffold Genes | 61 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 44 (72.13%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Inlet → Unclassified → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: British Columbia | |||||||
Coordinates | Lat. (o) | 48.6 | Long. (o) | -123.5 | Alt. (m) | Depth (m) | 10 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F005352 | Metagenome / Metatranscriptome | 403 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0257114_100024341 | F005352 | AGG | MDYNNPQLDKPYIQLICHPYEHETSVNTRITIDVMQKDLKRDDIVEVLEGFMKAMGYGFSDGESLCIEHVYARHFNENSDTE |
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