Scaffold Ga0255353_1017985

Overview

Basic Information

• Taxon OID: 3300028070
• Scaffold ID: Ga0255353_1017985
• Source Dataset Name: Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1906
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil → Peatland Microbial Communities From Stordalen Mire, Sweden

Source Dataset Sampling Location

• Location Name: Sweden: Norrbotten County, Stordalen Mire
• Coordinates
  • Lat. (^o): 68.3529
  • Long. (^o): 19.0475
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F085038	Metagenome	111	N
F089728	Metagenome	108	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0255353_10179851	F089728	GGAGG	MKPIVMLWAAAIAIVGSCLFWRNRRRYRRKAFLWVAMKSAVELLILFLVAALMPALLIVWLVVWVTRPIKTPWVRTIVGVLSGVVFGIFSSFALEALIFFGIFAIDLKTGAHDGGFLHCWKRAREEDADRHSTMRMPEAQAA
Ga0255353_10179854	F085038	N/A	MKLIFGFLLFVATVAVTGGLYLVIRKEDDKKCDLQRLYSLPSQIAKRVQSLGDYLFNLFGSKPEASEEHPGAGVTAAA