Basic Information | |
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Taxon OID | 3300027394 Open in IMG/M |
Scaffold ID | Ga0209904_1000977 Open in IMG/M |
Source Dataset Name | Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2481 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost → Thawing Permafrost Microbial Communities From The Arctic, Studying Carbon Transformations |
Source Dataset Sampling Location | ||||||||
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Location Name | Sweden: Kiruna | |||||||
Coordinates | Lat. (o) | 68.3534 | Long. (o) | 19.0472 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F006352 | Metagenome / Metatranscriptome | 375 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209904_10009775 | F006352 | AGGAGG | MFQSRIAEWSYYLGCVTAAVAIVYRPLWLGSLGVRLFETPRVLPHNLMDLSILLFVVSIASNARTMVHPAHPEDGKAVAKGN |
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