Basic Information | |
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Taxon OID | 3300026451 Open in IMG/M |
Scaffold ID | Ga0247845_1000169 Open in IMG/M |
Source Dataset Name | Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 13907 |
Total Scaffold Genes | 11 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 9 (81.82%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil → Peatland Microbial Communities From Stordalen Mire, Sweden |
Source Dataset Sampling Location | ||||||||
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Location Name | Sweden: Norrbotten County, Stordalen Mire | |||||||
Coordinates | Lat. (o) | 68.3533 | Long. (o) | 19.0466 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F021886 | Metagenome / Metatranscriptome | 217 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0247845_100016911 | F021886 | GAGG | MTWETILNLIHDEWMILLLLLLWSVAGVTIICERVYALWNVLAKSEAFKNQVIGAIEGGDLPKAHAFCETSNDPLATVFGRGLRVFAKTPQKTTEAVMSQRTVAIGSFKRYL |
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