Scaffold Ga0209203_1035457

Overview

Basic Information

• Taxon OID: 3300025702
• Scaffold ID: Ga0209203_1035457
• Source Dataset Name: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC109_MetaG (SPAdes)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1971
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge → Active Sludge Microbial Communities Of Municipal Wastewater-Treating Anaerobic Digesters From Various Locations

Source Dataset Sampling Location

• Location Name: Hong Kong
• Coordinates
  • Lat. (^o): 22.28
  • Long. (^o): 114.17

Associated Families

Family	Category	Number of Sequences	3D Structure?
F077339	Metagenome / Metatranscriptome	117	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0209203_10354573	F077339	N/A	MNTTLEIPEGSKATIQGTVIDGKNYLVVEVEEREEPEWTKFKRGDVLVKPAVCKRDEIFVIFEEYMVDSNHTYFNCIFNNANDGETYWVSELFRKATDAEKAGFFKWLEKEKGLEWDGEKLVNVLKEGDLAMFWDVNPRDAFIDIYKGFRDGCYVSHRDAYWDNALKWDGTKAQYEKVLRGELK