Basic Information | |
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Taxon OID | 3300023442 Open in IMG/M |
Scaffold ID | Ga0256751_1294295 Open in IMG/M |
Source Dataset Name | Hydrothermal Fe-rich mat microbial community from Rainbow Site, Mid-Atlantic Ridge, Atlantic Ocean - 664-SC8 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Delaware |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 640 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Fe-Rich Mat → Hydrothermal Fe-Rich Mat Reference Genomes |
Source Dataset Sampling Location | ||||||||
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Location Name | International: Rainbow Site, Mid-Atlantic Ridge | |||||||
Coordinates | Lat. (o) | 36.229322 | Long. (o) | -33.902767 | Alt. (m) | Depth (m) | 2294.86 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F081350 | Metagenome / Metatranscriptome | 114 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0256751_12942951 | F081350 | N/A | MTKIRSTRARSTCALLVWTIAWVASEAHAKSPFLYGGEPVHPACVHALTMNQGDAVPVTTAVSLEGCSSSERSKSRVHYVKDVATFEDDALLGGGSFGYREITQLDNGIYGLAILRVLPDGEERVSLAAIRMIQRPMIRQGNIVQLQLIELLGEVWIPDIEMLSFRSVGNVVEFSAGVGPKKVHRKVDFTRIGKMRK |
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