Scaffold Ga0211697_10243535

Overview

Basic Information

• Taxon OID: 3300020458
• Scaffold ID: Ga0211697_10243535
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 744
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_076
• Coordinates
  • Lat. (^o): -20.9724
  • Long. (^o): -35.2742
  • Depth (m): 800

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004989	Metagenome / Metatranscriptome	416	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211697_102435352	F004989	N/A	MSIELKELTAEKERLEGDRKTLLERLQEYQQGLTQTQQQIQAIGGAIQTCNFFIGKIQSPQESEDEKESSDDDS