Scaffold Ga0211664_10000208

Overview

Basic Information

• Taxon OID: 3300020455
• Scaffold ID: Ga0211664_10000208
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 55227
• Total Scaffold Genes: 38
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 24 (63.16%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans

Source Dataset Sampling Location

• Location Name: TARA_100
• Coordinates
  • Lat. (^o): -12.9226
  • Long. (^o): -96.0932
  • Depth (m): 50

Associated Families

Family	Category	Number of Sequences	3D Structure?
F035474	Metagenome / Metatranscriptome	172	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211664_1000020827	F035474	N/A	MSNSKTLFQQCINLCDDYLGFEWSQGVRTNSFDSYRRENTLDPNLSIYHYGGDVFKVESMDYDSSKGCLIGTSINLGSFDNIEDAEDCAETYLKDLAMSQV