Basic Information | |
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Taxon OID | 3300020404 Open in IMG/M |
Scaffold ID | Ga0211659_10028820 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2691 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (16.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_102 | |||||||
Coordinates | Lat. (o) | -5.254 | Long. (o) | -85.2248 | Alt. (m) | Depth (m) | 5 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F034143 | Metagenome / Metatranscriptome | 175 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0211659_100288202 | F034143 | N/A | MHSVDLNYDPWQYLTVENFLSPDRWENIQNLARSEMNAYHDREGLTPSGKWIRWLDEDILPESNVLHKKMKRFREPPKNVKKIMHWAVCPPNYTMPMHCDYDARFFTSVLYIDPPQSFGTILCKNDSEYNDFDLRNTPFESNEYELEVPWQPNKIFSFNNLPKSWHYYKAGELPRICIQSFFVDVDKIVKGKEEWDHLIDIDQKFYS |
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