Scaffold Ga0211522_1011588

Overview

Basic Information

• Taxon OID: 3300020314
• Scaffold ID: Ga0211522_1011588
• Source Dataset Name: Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556135-ERR598974)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: CEA Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1823
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: TARA_036
• Coordinates
  • Lat. (^o): 20.8199
  • Long. (^o): 63.5138
  • Depth (m): 17

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006772	Metagenome	365	Y
F045677	Metagenome	152	N
F048238	Metagenome	148	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0211522_10115885	F006772	N/A	MERLNKAIQLATTADLQRAAMFLEGAREVRQGSRRQRTNARSAQAAAWKKKVDNSITW
Ga0211522_10115886	F048238	N/A	MGTKNVHLHYCQIADEHCPLAITRFTTFDLDDKPLAVEQVTYESNIDYMERQVINALRCNVEVSILTSTPICEFKRLHHIFNCDK
Ga0211522_10115887	F045677	N/A	MKKVETLLPEELIEKLSAEAKEKGIHRSELIRERLMQPPNHLGLTTSDFHKAVTKVRRRSSYGLDRQQAESLVATVFNELCRSGDGD