Scaffold Ga0211495_1096369

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0211495_1096369

Scaffold Ga0211495_1096369

Overview

Basic Information
Taxon OID	3300020268 Open in IMG/M
Scaffold ID	Ga0211495_1096369 Open in IMG/M
Source Dataset Name	Marine microbial communities from Tara Oceans - TARA_B000000477 (ERX556113-ERR599107)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	CEA Genoscope
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	557
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location
Location Name	TARA_066
Coordinates	Lat. (^o)	-34.8477	Long. (^o)	18.1136	Alt. (m)		Depth (m)	30
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F068869	Metagenome / Metatranscriptome	124	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0211495_10963691	F068869	N/A	MRMKNKLLTILSFLLISMSISQADETFSNNISDFYGIDSFPLLPGEYNFVFADEITHDGSFQPVDNFNNSRPNSSIQGEIRTGNIDAYIADGNSISLNFAILQDGSTENDFRKTFYACNVVRDPTELVSSTIEVFDDNSFVEFCAFKFPEFNFASYNYNFCKDKCVELQYTFFLTDMKDTSKDVM

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