Scaffold Ga0192924_1013825

Overview

Basic Information

• Taxon OID: 3300018764
• Scaffold ID: Ga0192924_1013825
• Source Dataset Name: Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_076 - TARA_N000000868 (ERX1782470-ERR1712186)
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: Canada's Michael Smith Genome Sciences Centre
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 908
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Location Name: South Atlantic Ocean: TARA_076
• Coordinates
  • Lat. (^o): -21.092
  • Long. (^o): -35.417
  • Depth (m): 150

Associated Families

Family	Category	Number of Sequences	3D Structure?
F034456	Metatranscriptome	174	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0192924_10138251	F034456	N/A	TWGVAHLHAHTPVYLEDSSHIQPTKMLSTKLVVALVVAIQLACLLDQAEGMGLCFGGGYPACCSGGKNTCGPFCASCSRVGEFLRHMMMFDMMGFGKGTPGVFRLINPDPHSQPGKVPFPAKPFPTNSRPRRSSEGILSMIARKK