Scaffold Ga0186123_121896

Overview

Basic Information

• Taxon OID: 3300017164
• Scaffold ID: Ga0186123_121896
• Source Dataset Name: Metatranscriptome of marine eukaryotic communities from unknown location in H/2 medium with NH4Cl, at 23 C, 35 psu salinity and 289 ?mol photons light - Guillardia theta CCMP 2712 (MMETSP0046_2)
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: National Center for Genome Resources
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 532
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Source Dataset Sampling Location

• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F096687	Metagenome / Metatranscriptome	104	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0186123_1218961	F096687	AGAAG	MLEILYGKKAAALYTQAGDYQKTARFYYKKAEDTYYQANNWASYDDWRRARDQWDYFYSRNR