Scaffold Ga0186122_113119

Overview

Basic Information

• Taxon OID: 3300017027
• Scaffold ID: Ga0186122_113119
• Source Dataset Name: Metatranscriptome of marine eukaryotic communities from unknown location in H/2 medium, no silicate, at 23 C, 0 psu salinity and 696 ?mol photons light - Hanusia phi CCMP 325 (MMETSP1048)
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: National Center for Genome Resources
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 755
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Source Dataset Sampling Location

• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F023110	Metagenome / Metatranscriptome	211	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0186122_1131191	F023110	GAG	MLDDAPWTWESSWNKDMPSFFQGMPNGVYDNIYDDLDDSPVSYHTTQPVDPTEYQNEWLGDVINIY
Ga0186122_1131192	F023110	N/A	MMFKVLPSRSLELAPWTWQSSWNRDMPSFFQGMPNGVYDNIYDDLDDSPVSYHTTQPVDPTEYQNEWLGDVINIY