Scaffold Ga0126362_10226961

Overview

Basic Information

• Taxon OID: 3300016461
• Scaffold ID: Ga0126362_10226961
• Source Dataset Name: Continental margin sediment microbial communities from China - ANME2c_DSS_Sorted metaG
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 684
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. FS41 (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Continental Margin Sediment → Continental Margin Sediment Microbial Communities From Various Locations

Source Dataset Sampling Location

• Location Name: China: Qiqihar, Heilongjiang
• Coordinates
  • Lat. (^o): 47.5233
  • Long. (^o): 125.0078
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F053764	Metagenome / Metatranscriptome	140	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0126362_102269611	F053764	N/A	TPGHQMVNTEIILIIFFAAKDGEALSSQQKQDQELTVAQTMNSLLPNSDRK