Scaffold Ga0167647_1098828

Overview

Basic Information

• Taxon OID: 3300015199
• Scaffold ID: Ga0167647_1098828
• Source Dataset Name: Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Bristol
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 729
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils

Source Dataset Sampling Location

• Location Name: Storglaci?ren, Tarfala, Sweden
• Coordinates
  • Lat. (^o): 67.899244
  • Long. (^o): 18.344371
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F037998	Metagenome	167	Y
F055264	Metagenome / Metatranscriptome	139	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0167647_10988281	F055264	N/A	ETLSSISNRMNMGNRTGLEAEAINRLTDDVQPPMMRAILVQCLAGDIASSAAISRMLAEGPVSTVRAAIDDVTQRAATISRASDMLVHDRVDELTQVFVENVSALADVSGATKTRSAAKAARKARSDRASESGDRGEPRISE*
Ga0167647_10988282	F037998	N/A	GRRPRQLIVVWGFSMLLMLLINWLETQAPALHELVLPFYWIILAVAFYLTWRWLRARSKKDRRGADRRHVERRDENESPGSDN*