Scaffold Ga0119946_1013819

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0119946_1013819

Scaffold Ga0119946_1013819

Overview

Basic Information
Taxon OID	3300014801 Open in IMG/M
Scaffold ID	Ga0119946_1013819 Open in IMG/M
Source Dataset Name	Aquatic microbial communities from drinking water treatment system in Nanjing, China - Filtered water - FW
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Nanjing University
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	834
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (33.33%)
Novel Protein Genes	2 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Associated Families	2

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment System In Nanjing, China

Source Dataset Sampling Location
Location Name	China: Nanjing
Coordinates	Lat. (^o)		Long. (^o)		Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F067885	Metagenome	125	N
F090300	Metagenome	108	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0119946_10138191	F090300	N/A	LPAWYYRYARWKPLTCLTCLAFWWGVVLTITASNLHWLLAIPVGLSSAGLTVLTIKLSEK
Ga0119946_10138192	F067885	GGA	MTLDEALQVLSVKHKLDGYYASQTMSLSPSEVSMLENVANANGYGRTNWWCGSCAVSRLQEMMADAMDARARFAS*

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