Scaffold Ga0119946_1001483

Overview

Basic Information

• Taxon OID: 3300014801
• Scaffold ID: Ga0119946_1001483
• Source Dataset Name: Aquatic microbial communities from drinking water treatment system in Nanjing, China - Filtered water - FW
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Nanjing University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3206
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (25.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment System In Nanjing, China

Source Dataset Sampling Location

• Location Name: China: Nanjing
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F011581	Metagenome / Metatranscriptome	289	N
F043476	Metagenome	156	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0119946_10014834	F011581	AGG	MTYHSTRPAKALTNALERLMISISAQELEENRVLLCEYRRACDLLGYDPAKAQWSNVEGVNASGLPNDEPHTVDYYYLLNPEE*
Ga0119946_10014838	F043476	AGGAGG	MLTLPTNIDRAEIEAFVNHVTAEVMDGNVDPLSVHIRCKAVVKALEAIIELTEEVAKDTAATYGKGEFKFHGASVQLREPRDMPDFNHDPVCVELADRLKARHELVKTAFKMADTAAIVDPNTGEVVPVVPVKPAKT