Basic Information | |
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Taxon OID | 3300014801 Open in IMG/M |
Scaffold ID | Ga0119946_1001483 Open in IMG/M |
Source Dataset Name | Aquatic microbial communities from drinking water treatment system in Nanjing, China - Filtered water - FW |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Nanjing University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3206 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (25.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment System In Nanjing, China |
Source Dataset Sampling Location | ||||||||
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Location Name | China: Nanjing | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F011581 | Metagenome / Metatranscriptome | 289 | N |
F043476 | Metagenome | 156 | N |
Protein ID | Family | RBS | Sequence |
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Ga0119946_10014834 | F011581 | AGG | MTYHSTRPAKALTNALERLMISISAQELEENRVLLCEYRRACDLLGYDPAKAQWSNVEGVNASGLPNDEPHTVDYYYLLNPEE* |
Ga0119946_10014838 | F043476 | AGGAGG | MLTLPTNIDRAEIEAFVNHVTAEVMDGNVDPLSVHIRCKAVVKALEAIIELTEEVAKDTAATYGKGEFKFHGASVQLREPRDMPDFNHDPVCVELADRLKARHELVKTAFKMADTAAIVDPNTGEVVPVVPVKPAKT |
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