Scaffold Ga0119898_1001594

Overview

Basic Information

• Taxon OID: 3300013800
• Scaffold ID: Ga0119898_1001594
• Source Dataset Name: Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - ZZ_EW_meta
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Nanjing University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4116
• Total Scaffold Genes: 9
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Municipal Sewage Treatment Plants In Nanjing, China

Source Dataset Sampling Location

• Location Name: China: Nanjing
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F060093	Metagenome	133	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0119898_10015945	F060093	GAGG	MANEAYIRKGTSKLVNGEAGADVALSMEGVASAAGRVSAQIDWGAAPRPAIYEWSCEVQWQATPTQGGMLELYVAGAPDGDSTQIDGDVGTTDAALGDVDMRRNLRYIGCVVSENAAASEICVASGTFEFTQRYMSIVGYNGGGATINATDSNFRFNIVPVYWQGQ*