Scaffold Ga0118076_105611

Overview

Basic Information

• Taxon OID: 3300013715
• Scaffold ID: Ga0118076_105611
• Source Dataset Name: Human skin bacterial and viral communities - University of Pennsylvania - MG100349
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Pennsylvania
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 569
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Pucciniomycotina → Pucciniomycetes → Pucciniales → Pucciniaceae → Puccinia → Puccinia striiformis → Puccinia striiformis f. sp. tritici → Puccinia striiformis f. sp. tritici PST-78 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Skin → Unclassified → Unclassified → Human Skin → Human Skin Bacterial And Viral Communities - University Of Pennsylvania

Source Dataset Sampling Location

• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F035626	Metagenome / Metatranscriptome	171	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0118076_1056111	F035626	AGG	MAPSIIANNAIQGEVFLPGQIFVFGGLVLRANSLGHLEQIESYAPGHQVGFGNLNYTANIRGDLIFDGFEPVSGAPHNHNEHDLALWPDSVREITPVATPALD