Scaffold Ga0119867_1071416

Overview

Basic Information

• Taxon OID: 3300012018
• Scaffold ID: Ga0119867_1071416
• Source Dataset Name: Activated sludge microbial communities from Shanghai, China - membrane bioreactor - Activated sludge (MBR)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Tongji University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 943
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Communities From Shanghai, China

Source Dataset Sampling Location

• Location Name: China: Quyang, Shanghai
• Coordinates
  • Lat. (^o): 31.3
  • Long. (^o): 121.5

Associated Families

Family	Category	Number of Sequences	3D Structure?
F053267	Metagenome / Metatranscriptome	141	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0119867_10714161	F053267	N/A	MANQYRDIDPEELKKVAMDYCDFCIESTKEVATNGGKATEIKERHIPTVSYFLLHWLRRNDFEFYKRANWYDAMNNKNHPLSDTIKSIDSMFEGLAVDIVANEGKGIFYAENKLGM