Basic Information | |
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Taxon OID | 3300012002 Open in IMG/M |
Scaffold ID | Ga0153774_1142279 Open in IMG/M |
Source Dataset Name | Saline lake microbial mat microbial communities from Tebenquiche Lake, II Region de Antofagasta, Chile - Tebenquiche 201212 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | INDEAR Instituto de Agrobiotecnologia Rosario |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1336 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Saline Lake Microbial Mat → Saline Lake Microbial Mat Microbial Communities From Tebenquiche Lake, Ii Region De Antofagasta, Chile |
Source Dataset Sampling Location | ||||||||
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Location Name | II Region de Antofagasta, Chile | |||||||
Coordinates | Lat. (o) | -23.138472 | Long. (o) | -68.247194 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F036102 | Metagenome / Metatranscriptome | 170 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0153774_11422793 | F036102 | AGGAGG | MERQEMMELFKATADVNTKEGIEAYRAFAAALTTPILQKVEMDSIMRQLFTPERLGPGAQAVYPVAEDFEIPVWVLPGLGYIAQ |
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