Scaffold Ga0151514_10192

Overview

Basic Information

• Taxon OID: 3300011115
• Scaffold ID: Ga0151514_10192
• Source Dataset Name: Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016May
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Finished

Scaffold Components

• Scaffold Length (bps): 30433
• Total Scaffold Genes: 42
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (19.05%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (25.00%)
• Associated Families: 4

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location

• Location Name: Gangwon-do, South Korea
• Coordinates
  • Lat. (^o): 37.947421
  • Long. (^o): 127.818872
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F041191	Metagenome	160	Y
F042157	Metagenome	158	N
F044325	Metagenome	154	Y
F049410	Metagenome	146	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0151514_1019210	F044325	N/A	MKTLIQRLLFGYRPNRDAYFPRGGAKLTYKGGNAEAIHSALVLLKFQLQNGKG*
Ga0151514_101922	F042157	N/A	MKLKQKYHSPDNRQLKKIADYLIYVLLPFIQTSLALAETQGLITLKQAFWGGLVATFLLVNTKFLTKFTTNKPTTTAVIDGDGC*
Ga0151514_101924	F049410	GGA	MTRGTRYTNGKEVITFSKIDFIVIGGRKIDHVYFRRKDKVDLIMPLVEWNLKGKFEWEITN*
Ga0151514_101926	F041191	N/A	MVEKMRLLWKPTKLTCDIIVPDLAKSHGVQKVIGFSRGWHHYNSIRLGIRKEDTYIVLYFYAYIKGQRTIQRIGRYEIGELVKCELNWGSYIECKANDGYAFRIAPRHSLPFGYQLYPYAEKDGVEGVKIDIDIVIMDLKIK*