Scaffold Ga0151517_1828

Overview

Basic Information

• Taxon OID: 3300011113
• Scaffold ID: Ga0151517_1828
• Source Dataset Name: Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Sep
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Finished

Scaffold Components

• Scaffold Length (bps): 10087
• Total Scaffold Genes: 12
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (83.33%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea

Source Dataset Sampling Location

• Location Name: Gangwon-do, South Korea
• Coordinates
  • Lat. (^o): 37.947421
  • Long. (^o): 127.818872
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F031756	Metagenome	181	Y
F093250	Metagenome	106	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0151517_18284	F093250	AGG	MEADKALNIVVKTIDNKVVQLQEALADGRVENFEEYKKVCGEIRGLLTARNYIMDLNKAMESSDE*
Ga0151517_18287	F031756	AGGAGG	MEAYVPVIEENVPLPKNASEAFPDLTPTEELNMRAAVVALMSDLTGQPIAPSKENVEEAKAIAKEMLTNPLVRPDFSKYPNETLAMLAGMVAQMKVSIVDELAELKTYVVNHLVHSVEASKDVKTKIAALRALGEVDGVDAFKKRTETTIKIQTMEEVENELLSLLDDVESKYIDVEAKEVVRKERNDS*