Basic Information | |
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Taxon OID | 3300011113 Open in IMG/M |
Scaffold ID | Ga0151517_1165 Open in IMG/M |
Source Dataset Name | Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Sep |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Chunlab, Inc |
Sequencing Status | Finished |
Scaffold Components | |
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Scaffold Length (bps) | 28573 |
Total Scaffold Genes | 45 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 10 (22.22%) |
Novel Protein Genes | 7 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 4 (57.14%) |
Associated Families | 7 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Viral Communities From Lake Soyang, Gangwon-Do, South Korea |
Source Dataset Sampling Location | ||||||||
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Location Name | Gangwon-do, South Korea | |||||||
Coordinates | Lat. (o) | 37.947421 | Long. (o) | 127.818872 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F050992 | Metagenome | 144 | N |
F057997 | Metagenome | 135 | N |
F062576 | Metagenome | 130 | N |
F066595 | Metagenome | 126 | N |
F068604 | Metagenome | 124 | N |
F075863 | Metagenome | 118 | N |
F102810 | Metagenome | 101 | N |
Protein ID | Family | RBS | Sequence |
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Ga0151517_116516 | F068604 | N/A | MANALRLTANGGCEYIDNTTARTGKKYYCFIVQADTVVGTLTGGLNGDTTTNYLSSIGLSGKTLKQGAIIYAPGDAVFTNLTLTSGTIIAYAE* |
Ga0151517_116525 | F057997 | GAG | MNLMYFIKKRAMENKKQTFKEVFSDMKDLFKDIFQDEIKDLKFADYKAADGTIIRTDTEEIAVGSKLQVITPDGVMDVPVEVTEMVIMVNEQPMKVYVENGVVKGLEPEVMEEEPVMEEMNSNQEFETKFNELNERLSKLEAALGISNTALEAANAQIVAQNDLNRKLFSLIEKVADAPSVEPKSTSKENFKKVNTTTSLEEFRKQVFK* |
Ga0151517_116531 | F062576 | AGG | MMTITIPNTWHEISIDKFPLIYDIVRDKEIDAIDREIRVISIIADIPVHEVERIRIDQLKELIKSVNFIFQMEFPKAVEVFKHNNYRWIVNFDITKLNAGDFISLAKLTESEESIIANLPQLVAIFVKPYKLSWLKYKEVEMDYKQRVEHIKSMNVGIVYPLCVFFCKLIENLYPTIEDYLVNQMKEARETIQRELKEQNSKNT* |
Ga0151517_116536 | F050992 | AGG | MIPENIKEQLLKWEQMGKNYSPTFNWTELNELAIKCGNKPFNLGCGDCRKQLLEYLLAVIKDGK* |
Ga0151517_116537 | F066595 | AGGA | MLQLLATTYIIAKYIPKPKLLMRKPFTCPLCLTYWSFLIYQIINFTTYFDLLTIPFTFALLASLIEQINDRYLL* |
Ga0151517_11654 | F075863 | N/A | MKTQEQAILDALLGGQVITGSNAYAITKKECACGTLNLHKVLAKIREKGYTINECWKQNPKTKVNYKEFTITNKKQKKNGN* |
Ga0151517_116545 | F102810 | N/A | VIDELVNNRIYKQITRNVCHNHYLWEDLHFESVLIIIEKKFDLSEIRNLKHFYSAVCWRTWHSNKFKKKYLTDFVQYVDNLNEVIENEDEIDYSTLINFLSYSPQTESEFYEQNLLKLYIQHGDAKKLSDKTKIPYRTVANDIKQIKEKLKRQHNDKNFNKG* |
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