Basic Information | |
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Taxon OID | 3300010410 Open in IMG/M |
Scaffold ID | Ga0136992_10000089 Open in IMG/M |
Source Dataset Name | Aquatic microbial communities from North Sea petroleum storage tank - Cell4b |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Shell Corporation |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 33340 |
Total Scaffold Genes | 31 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 25 (80.65%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Aquatic → Subsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | North Sea | |||||||
Coordinates | Lat. (o) | 60.9 | Long. (o) | 1.8 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F025288 | Metagenome / Metatranscriptome | 202 | N |
F031475 | Metagenome / Metatranscriptome | 182 | N |
Protein ID | Family | RBS | Sequence |
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Ga0136992_1000008926 | F031475 | GGA | MGANTSDSSQDSLNANPQKQREKLTQLDFLTLEMMGISLEELRALLDEEELQAYFAFLRRQSSDLDSTSP* |
Ga0136992_1000008927 | F025288 | AGGA | MKNIWIWITLTVIVIFGLIAGAGLLGYQVGLRSANALAPQIDEDRALPRQLMPWLRTAPDGGIIRRPTGFIGYFFLFPLGLLLRLAILVLVVWLVVKVAKAAWNSGNHKPQPAEAVITQTPEKTPEATVSAAPPEEAAPPSEATQGGEK* |
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