Basic Information | |
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Taxon OID | 3300009870 Open in IMG/M |
Scaffold ID | Ga0131092_10001727 Open in IMG/M |
Source Dataset Name | Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Beijing Novogene Bioinformatics Technology Co., Ltd |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 47342 |
Total Scaffold Genes | 43 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 26 (60.47%) |
Novel Protein Genes | 6 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 3 (50.00%) |
Associated Families | 6 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan |
Source Dataset Sampling Location | ||||||||
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Location Name | Tai Wan | |||||||
Coordinates | Lat. (o) | 25.0 | Long. (o) | 121.0 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F026047 | Metagenome / Metatranscriptome | 199 | Y |
F035236 | Metagenome | 172 | Y |
F038748 | Metagenome / Metatranscriptome | 165 | Y |
F045207 | Metagenome / Metatranscriptome | 153 | Y |
F059117 | Metagenome | 134 | Y |
F066913 | Metagenome | 126 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0131092_1000172727 | F038748 | GGAG | MNKRPTVALAVAFLLGALLVASVPAFAQDPFAGLTNTLNSSARTWAAALMLVGALIAGGAIMMGSRESGHHTRNFLFGAIFLVLAGAGLAIYDRVAGMLN* |
Ga0131092_1000172728 | F026047 | N/A | MTRRQSECFRNLDDPLKVFSVLTVKSCGLVLLFYGGTVAAELLFGLFSLLFGGWSFLGQLGAALVVAVALALAERQDDEHLVPAAIRYYASRRWRVLYGGARGDRFAGHPLEGLVEGGPWPR* |
Ga0131092_1000172731 | F066913 | GGAGG | MKRRYLAVVVTVLLLLGPRSSSADPTNWAQLAQIIAWLQQIDQTLAQVNGFVEGIKTALADVYPNDVLRQIEIVLEPVDSIRTEVAKLACNWRFTPRVEQLRLALFQGGTFCRRDWNALFGAPTLTADWDLEHYYDWSAVRRLNLIRTRYEKGPERAAQAAWLAQEAIQGRDPLDGGQPYSPGYSQRLSALAAAELGNVMVETGDTQTAMLELDQEALNDKRRKRLLAHESAALVYLDMARRGQSQLQAPVELGLLGDRP* |
Ga0131092_1000172733 | F045207 | N/A | MKGFDVTQIIQSQPVLEAVLKARDIGRLLAGIEALLLAFVCWYRIHAGAPWITVTKDWFFGIFVCAYVLTTAGTAAGLERWLWEVGVYLGHQFSPSQGFLMENFDRAVGRHGELMLWLQKIVPTLGDDERRLVEAVAWQFSSPFVAGFVGLNAIAIYLMKMVMQVSYAWLISFYWMLTPMVAPMVILPQTRGVFVGWLKTYIAIALWPMFFAFAERLALAIPWSAWLGEFDGAVSSWDMATSWFQGEFMLLIFNITFFFVYLSIPVASYLIVSGASRPFRAM* |
Ga0131092_1000172739 | F059117 | AGGA | MSASDSRFIAIWASHEARAKLWFRLFLLASAGLAVSLVTTIRVWNRPREVIRIGCDGIPQVVRLDNASYSEPNEREIRAFATEFAVFYARSDSYSILNDLVWCANRMAPELRERFKRSVRGTPQSPGLIQVIEKLHRRTQIDPATLEIHVDKGPYPWKVQIKGVRQVVGDQTPGETFELALDLVRASREEQLDGLLVWAIRAKGDPIETVLAAVGAEGSRVP* |
Ga0131092_1000172741 | F035236 | N/A | VNLLLGLPFIALVWGLLLPLLFLDGAQAYLAFLWKNPRVVAVLVLNLGVVSYWLGRRLSQALLLRATGAKLRATHEPP* |
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