Scaffold Ga0131092

Basic Information
Taxon OID	3300009870 Open in IMG/M
Scaffold ID	Ga0131092_10000388 Open in IMG/M
Source Dataset Name	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Beijing Novogene Bioinformatics Technology Co., Ltd
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300009870 Open in IMG/M

Scaffold ID

Ga0131092_10000388 Open in IMG/M

Source Dataset Name

Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Beijing Novogene Bioinformatics Technology Co., Ltd

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	100304
Total Scaffold Genes	88 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	51 (57.95%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (40.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

100304

Total Scaffold Genes

88 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

51 (57.95%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (40.00%)

Associated Families

Taxonomy
All Organisms → cellular organisms → Bacteria	(Source: IMG/M)

Taxonomy

All Organisms → cellular organisms → Bacteria

(Source: IMG/M)

Source Dataset Ecosystem
Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Ecosystem

Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location
Location Name	Tai Wan
Coordinates	Lat. (^o)	25.0	Long. (^o)	121.0	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Tai Wan

Coordinates

Lat. (^o)

25.0

Long. (^o)

121.0

Alt. (m)

Depth (m)

Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002465	Metagenome / Metatranscriptome	557	Y
F006066	Metagenome / Metatranscriptome	382	Y
F016286	Metagenome / Metatranscriptome	248	Y
F023468	Metagenome / Metatranscriptome	210	Y
F052667	Metagenome / Metatranscriptome	142	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0131092_1000038820	F002465	GGAG	MPTSKPPKPDPNQELTGRRIAEFAVEESRLSNVAYRFQLVPRDRVWKNWDRTEFEPNHFRVVGLAGICLSRDEVEKAERAASRALEEVDGILFTVEDPADSIVVRGATGTMEFVRTPTLCAEIMAGSVEAFERALAALGAAFPGDRVAGKILSEGK*
Ga0131092_1000038830	F006066	N/A	MRRRPGEAPATHRVWLSPDQPFREGPSADGKVYFRIRLDGEPSPEWMRAYRAGLLGLVPEDRDAVLRFEFQGDSVRFAANDAEVGKLRRILEKRVEAVNGILSGGRSVGP*
Ga0131092_1000038839	F016286	N/A	VSRAARGAAAALVLLAAACGGGLKTVAKDGYRAVLAFSKDERFEVAVRGESKRVEARMDGAPLVKILRPDLKQIWQIRPSTRKFMATPWTPTEELVPGYPLEPNFDPRAYADRFGGQIRKIGDDAHGLHPCDRWQMSLPSGDQVTIWVARDLEKLVVKIEHAKKDQGDEYQPFTTTELLDVRVGADTDLFEKPKGYTEVKTYADLLK*
Ga0131092_1000038874	F023468	N/A	MERKSQSNGGMMKKHFAAVLLVVAFVPAAFGQDSGSRIYQISSMFSGTWEGSTPGNHLVLNLSPVTLEPARPYDLFLSIMGTFEKDNVVQQGVIRLETQGKDIYFTYIPHFDTQVTALSNDAGRFTERELSSACSFVLNPRGDGFGGDTLGSTTCALAMRGAIGKWSVDLEPGVLRLRNVDSGETLRFRKTGSREK*
Ga0131092_1000038880	F052667	AGG	MTEPIGFRETTTEASPMAGQLRDAVAVRFDPSRRVMLRFQVALPDDQALEALRYARRAMIREERTRGLEWDEPSMEDPSIAGHELRWFALASQAAWCRQKVAELVERANRALEDLNAAR*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0131092_10000388

Overview

Ecosystem & Geography

Associated Families

Sequences