Scaffold Ga0130016_10000127

Overview

Basic Information

• Taxon OID: 3300009868
• Scaffold ID: Ga0130016_10000127
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 164855
• Total Scaffold Genes: 166
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 100 (60.24%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Taiwan
• Coordinates
  • Lat. (^o): 25.0
  • Long. (^o): 121.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F015216	Metagenome / Metatranscriptome	256	Y
F056599	Metagenome / Metatranscriptome	137	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0130016_10000127150	F056599	N/A	VRKVSRTSGLAGVALVALVALGAAGVLGALYVTKEPAARVLLVKPCGERTFGHIRTLARDGSGRWLARFDPAWLTTGLTANTAAAEDGVVAPGEPVPNDNYRIDEGHRLLTYLVDPRARVTVLTRRGDPAQLGATPITVPELAALVRGEKPVELFEGLDTGVWLRVHGDTVCRIDQQYVP
Ga0130016_1000012758	F015216	GGCGG	VIDRILLSPERVTSAAEGKRLMAIDDEGEDVADRVQRVAVIATPIVRTLARGSRFLPRVPWVLVASTTASLAMTLRAGVHEVRVLGSLVAHRLEQATGRPADPRLVKQLTLELYLSPRRTPPLHGGLPLGRLVRKWLFRGAIGKDTRKAAWKALDAAEHLDVATLEARWRAR*