Basic Information | |
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Taxon OID | 3300009172 Open in IMG/M |
Scaffold ID | Ga0114995_10121475 Open in IMG/M |
Source Dataset Name | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1463 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Arctic Ocean: Canada Basin | |||||||
Coordinates | Lat. (o) | 73.2247 | Long. (o) | -150.2247 | Alt. (m) | Depth (m) | 7 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F014251 | Metagenome | 264 | Y |
F026436 | Metagenome / Metatranscriptome | 198 | N |
Protein ID | Family | RBS | Sequence |
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Ga0114995_101214751 | F026436 | N/A | MQKTQWIYESPDKGDTVYRRRFGSLQKELVFKKPDPHSISAHVAEIVSESPNDPAIKDMLDKLMVYWSLKNAKN* |
Ga0114995_101214754 | F014251 | AGGA | MVSGNLRSRVTDKASRLLNKIADELLNSNPNAIFRNGDSIIAFADYEIVKESSNEYSIYKDNYLVETCSSCRIALSYCILDKNKMQMDAKHLVALEDKLLGRQTEMMHYRHVITSPNTDEFRREVVITRLDTAKHEYHMIQKQLTKSINVAKYCQQKGFDNE |
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