Basic Information | |
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Taxon OID | 3300009122 Open in IMG/M |
Scaffold ID | Ga0118674_1058469 Open in IMG/M |
Source Dataset Name | Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C13.But.B IBDA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Molecular Research LP (MR DNA) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 909 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge → Syntrophic Microbial Communities From Biogas Reactors In Seattle, Wa |
Source Dataset Sampling Location | ||||||||
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Location Name | Seattle, WA | |||||||
Coordinates | Lat. (o) | 47.652555 | Long. (o) | -122.304991 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F029451 | Metagenome / Metatranscriptome | 188 | N |
F054066 | Metagenome / Metatranscriptome | 140 | N |
Protein ID | Family | RBS | Sequence |
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Ga0118674_10584691 | F029451 | N/A | VPEMAVDLEDLIASSSSKAGHPSIIEALLSTVDSIFTNNRMLQRSRLSARNIRGVVRVIGSQAFLRARLERSYKPFLDPDTGEFTYNRYDNRVLTAICEGALSGRISLDGKSREEIIRIFQAVGNTAQEESVGRGG |
Ga0118674_10584692 | F054066 | N/A | MLMFRTTRKAKELNRFRVGKGSPGLKAVMYRMLNKPYLDIRIYRGYREVTRIVTPDKGMRRFVVDEVGAFVMPNEEQMLRQLHDRYALYINYNINSSAPGQVTEELEPIAFTYPPLSPAEFQTELEAQTVADLLAETEKDNSWIWLLAGGAVLIFIMILIFGGA* |
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