Scaffold Ga0103928_10313211

Overview

Basic Information

• Taxon OID: 3300009023
• Scaffold ID: Ga0103928_10313211
• Source Dataset Name: Planktonic microbial communities from coastal waters of California, USA - Canon-29
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Hawaii
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 589
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Coastal → Unclassified → Coastal Water → Planktonic Microbial Communities From Coastal Waters Of California, Usa

Source Dataset Sampling Location

• Location Name: Pacific Ocean
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F028813	Metatranscriptome	190	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0103928_103132111	F028813	N/A	LVIQSEAFLKRWCPARPENSPTIIRVLTTIKEFLSIKDLPIDERWQMLALSGAGSFDPKLDADPSDPVYTQWVHESMTLNKLACVTAGKEFTWGANVPASTVVVTKSFAETTSVAGMLQYVGRAARRGLTTHGQAIFERDEDLERIFASPDGLSTEALTMERYAEWWISRGEKW*