Scaffold Ga0103951_10139379

Overview

Basic Information

• Taxon OID: 3300008832
• Scaffold ID: Ga0103951_10139379
• Source Dataset Name: Eukaryotic communities of water collected during the Tara Oceans expedition - TARA_A200000150
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: Genoscope
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1103
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey

Source Dataset Sampling Location

• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F074919	Metatranscriptome	119	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0103951_101393793	F074919	N/A	MVSLMHGLLGWGEYLGGCTCVGDPVGVPVLGGIVDNKLTGKPHAAFLVNSTYLGRIKLGVEYADFQLVDKKPNWFKAMKSIKNMTVDHYSKWFLHLFLDADPESPTYRQPVRFYGPYSGFAVYKSVVAGVPPAEVWDTACVDNGWGTHEIKPLHPCRGKKLDTYKCMNVEKKHPDVCKPWEHGAGSADVETRLKGAFGDIIVPKVEQMTV*