Basic Information | |
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Taxon OID | 3300007871 Open in IMG/M |
Scaffold ID | Ga0111032_1096666 Open in IMG/M |
Source Dataset Name | Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf. Combined Assembly of MM2PM2 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Aarhus University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3182 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment → Marine Sediment Microbial Communities From Aarhus Bay Station M5, Denmark |
Source Dataset Sampling Location | ||||||||
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Location Name | Aarhus Bay station M5 | |||||||
Coordinates | Lat. (o) | 56.10555 | Long. (o) | 10.463333 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F038478 | Metagenome / Metatranscriptome | 166 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0111032_10966662 | F038478 | AGGAGG | VDETLQTKHPDLTAKLIDFDFGPNKIQIQATIFKELLEIDEEKAIKAFEELCRSFSEVCCEYHIKFDPIDLFILVDEELQIGTSTKFRDAYDESLFAEVLIPAKDFRMHEYWKYSFLHELGHSWFSVDFSPDDMECGHEDLFIDLVVICTFRKILPPDKRVYQEVRKHRPYFLTQQSKRFIGKELYKQILRDPEGYLRDLQQKIYSTHT* |
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