Basic Information | |
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Taxon OID | 3300007094 Open in IMG/M |
Scaffold ID | Ga0102532_1047144 Open in IMG/M |
Source Dataset Name | Freshwater lake microbial communities from Singapore - a non-axenic Oscillatoriales culture (M13A) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | The Singapore Centre on Environmental Life Sciences Engineering |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 5180 |
Total Scaffold Genes | 10 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (30.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake → Freshwater Lake Microbial Communities From Singapore - A Non-Axenic Oscillatoriales Culture (M13A) |
Source Dataset Sampling Location | ||||||||
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Location Name | Singapore | |||||||
Coordinates | Lat. (o) | 1.3991438 | Long. (o) | 103.77518 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F001272 | Metagenome / Metatranscriptome | 733 | Y |
F032582 | Metagenome | 179 | N |
Protein ID | Family | RBS | Sequence |
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Ga0102532_104714410 | F032582 | N/A | KQFAMDAVPIYGFRAHNCGISTDYYKSREREKVNAKTITAGLSHFNIWAAIKWMVESRITQHRVFLILEDDVEFTRPDWQSVLNDNLRVLPADWHVVYIGSCCTDGIENHTHIGQELYKLTRGMCTHAYLVNYEGACKLLETNQKVWAPIDVQMLVDSMPRMNFYGVLPRLATQENTNLHP* |
Ga0102532_10471443 | F001272 | N/A | MITIQLTTEQTNNLLALIDIAIKAGGFQNAKVGVPIADLILEAAKGTANAAGEKSE* |
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