Scaffold Ga0099772_1371013

Overview

Basic Information

• Taxon OID: 3300006647
• Scaffold ID: Ga0099772_1371013
• Source Dataset Name: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_4R (Metagenome Metatranscriptome)
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 607
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas hengshuiensis (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Source Dataset Sampling Location

• Location Name: Klosterneuburg, Austria
• Coordinates
  • Lat. (^o): 48.3
  • Long. (^o): 16.2

Associated Families

Family	Category	Number of Sequences	3D Structure?
F071145	Metagenome / Metatranscriptome	122	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0099772_13710131	F071145	GGAGG	MRKLSSIAGAALLAFTAFATPASAQSMSAGGSCGYSAGDYGFTDINSSKTMHAGESTVPALFYSVNYSGVPAPTTVGVIVRYNDELESQNAVAAFTAENSGGTFDGALRANISPEAQGGGNGIDTSFRG