Scaffold Ga0101566_10435246

Overview

Basic Information

• Taxon OID: 3300006618
• Scaffold ID: Ga0101566_10435246
• Source Dataset Name: Soil microbial communities from the Leymus chinensis steppe, China - without N addition
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chengdu Institute of Biology, Chinese Academy of Sciences
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 559
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From The Leymus Chinensis Steppe, China - Nitrogen Deposition

Source Dataset Sampling Location

• Location Name: the Inner Mongolia Grassland Ecosystem Research Station (IMGERS), China
• Coordinates
  • Lat. (^o): 43.63
  • Long. (^o): 116.7
  • Depth (m): .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004940	Metagenome / Metatranscriptome	418	Y
F030547	Metagenome / Metatranscriptome	185	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0101566_104352461	F030547	N/A	MGRSRGTSSQRYRFFMWIATALWLIGAIAAVIDRDTLNAVAWFGFAAAGVLTASGSTERSRGLAYLSIGLVVAAMAILIGVFLAD*
Ga0101566_104352462	F004940	AGGAG	MGEGDHPAKEQALKRLSEPEGDHELHSVLERMRVHHPHLWEALHRVHFSHEAGPSRLEDWRKAPEGSQEEVWAEHYD