Scaffold Ga0075447_10020729

Overview

Basic Information

• Taxon OID: 3300006191
• Scaffold ID: Ga0075447_10020729
• Source Dataset Name: Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2612
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (71.43%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From The West Antarctic Peninsula, For Metatranscriptomic Analysis

Source Dataset Sampling Location

• Location Name: Atlantic Ocean: West Antarctic Peninsula
• Coordinates
  • Lat. (^o): -64.8156
  • Long. (^o): -64.0406

Associated Families

Family	Category	Number of Sequences	3D Structure?
F046015	Metagenome	152	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0075447_100207292	F046015	AGGAGG	MICPRCMGNGYVKIPNEDVGIPKEIVAQCAMCESKGEIDEVDMPTDTDTDNKLQ*