Scaffold Ga0082037_1003523

Overview

Basic Information

• Taxon OID: 3300006094
• Scaffold ID: Ga0082037_1003523
• Source Dataset Name: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4734
• Total Scaffold Genes: 10
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (70.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir → Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation

Source Dataset Sampling Location

• Location Name: Brazil: State of Bahia
• Coordinates
  • Lat. (^o): -12.2
  • Long. (^o): -38.11
  • Depth (m): 500 to 1000

Associated Families

Family	Category	Number of Sequences	3D Structure?
F055749	Metagenome / Metatranscriptome	138	N
F095523	Metagenome / Metatranscriptome	105	N
F103315	Metagenome / Metatranscriptome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0082037_10035234	F095523	GGAGG	MGVSIPIEYLYITVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHVLGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQQTILRHRHDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNAADLVDRITAFKKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQKIADRKSAMADKLWTYGLIAIGLLGAVGVTIYIISLAAG*
Ga0082037_10035236	F055749	N/A	MNLIIAIAIGILTLIAVFSVIPVVGGSIDNAMPALGADSDWNTTTNPDLPSGASMWSQLGPLLVLAVLALVIGLVIMYFRNAAG*
Ga0082037_10035238	F103315	GGGGG	MITVEIYIFLAAVVAAAFVYIFLDLDNRLYGNLFAAAFAGILSGLLALWSFNENTVYITTVPETAITVDHYLNDTLANVTTTYAYQTHIVPIVDPALGYFWMLVMVFMWFLVGYFVLEIMHESRMPDDEEAYE*