Basic Information | |
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Taxon OID | 3300006094 Open in IMG/M |
Scaffold ID | Ga0082037_1003363 Open in IMG/M |
Source Dataset Name | Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 4916 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 7 (87.50%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → Caldilineales → Caldilineaceae → Caldilinea → Caldilinea aerophila | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir → Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation |
Source Dataset Sampling Location | ||||||||
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Location Name | Brazil: State of Bahia | |||||||
Coordinates | Lat. (o) | -12.2 | Long. (o) | -38.11 | Alt. (m) | Depth (m) | 500 to 1000 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F025288 | Metagenome / Metatranscriptome | 202 | N |
F031475 | Metagenome / Metatranscriptome | 182 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0082037_10033636 | F031475 | GGA | MDANTSDGSRDPLCANPQQQREKLTQLDFLTLEAMGTSLEELRELLDEEELQAYFAFLRRHSSDLDSISP* |
Ga0082037_10033637 | F025288 | AGGA | MKNKWIWITLSVILLLGLIAGAGALGYLMGLRNANALALQGDDNTPSPRQQIPGMRDGLIIRRPAAFIGYFFLFPLRLLLGLAVLLLVVWLVVKVAKAAWDGGNHKAKSTEATVSSAGTETIVTEAPASPSEPTNTVGSDQQ* |
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