Scaffold Ga0078745_1041801

Overview

Basic Information

• Taxon OID: 3300005823
• Scaffold ID: Ga0078745_1041801
• Source Dataset Name: Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 75 cmbsf, MM2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Aarhus University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1398
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → unclassified Desulfosarcina → Desulfosarcina sp. (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment → Marine Sediment Microbial Communities From Aarhus Bay Station M5, Denmark

Source Dataset Sampling Location

• Location Name: Aarhus Bay station M5
• Coordinates
  • Lat. (^o): 56.10555
  • Long. (^o): 10.463333

Associated Families

Family	Category	Number of Sequences	3D Structure?
F063346	Metagenome	129	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0078745_10418013	F063346	N/A	EHRTSNVEHRIMYSTIYNKDKATRPPRLSEPTKGRRALSTARDGGQERLPHSTFDVERSMFDVQIVTSEITTKPSYHVEITYTGQEF*