Scaffold Ga0073685_1073070

Overview

Basic Information

• Taxon OID: 3300005664
• Scaffold ID: Ga0073685_1073070
• Source Dataset Name: Freshwater viral communities from Emiquon reservoir, Havana, Illinois, USA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Illinois, Urbana-Champaign
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 933
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lotic → Unclassified → Aquatic → Freshwater Viral Communities From Emiquon Reservoir, Havana, Illinois, Usa

Source Dataset Sampling Location

• Location Name: Havana, Illinois, USA
• Coordinates
  • Lat. (^o): 40.362238
  • Long. (^o): -90.047137

Associated Families

Family	Category	Number of Sequences	3D Structure?
F100051	Metagenome / Metatranscriptome	103	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0073685_10730703	F100051	GGAGG	MFERIMCALFRHHFVIERVLNERARKVGCTRCGRSWAMHDPTRTFVPWDAEFESLYAPGGLLSESAAQGDKT*