Basic Information | |
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Taxon OID | 3300005057 Open in IMG/M |
Scaffold ID | Ga0068511_1010141 Open in IMG/M |
Source Dataset Name | Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Chunlab, Inc |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1232 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → Viruses → environmental samples → uncultured marine virus | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles |
Source Dataset Sampling Location | ||||||||
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Location Name | East Sea, Korea | |||||||
Coordinates | Lat. (o) | 37.0 | Long. (o) | 131.0 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F053965 | Metagenome / Metatranscriptome | 140 | N |
F077161 | Metagenome / Metatranscriptome | 117 | N |
Protein ID | Family | RBS | Sequence |
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Ga0068511_10101411 | F053965 | N/A | ADAIKEYKTAPINSPAERAAKEVITQITESEWWKSNVGTEFKWPKKYDNKKQQSIFTEPQFVFINNFIFGRHEFCENCRLYKGLLTYNSGQMLYAKPYIT* |
Ga0068511_10101412 | F077161 | GGA | MRNLTLPEIQARFDRHAKLHRFEVDKLFEKVKHKPFTEIQYRYLEIGIRHQFIYDIETSDFDPEQNFIICYCGILRDIVTEEIEHVQDSITKSDIKKAVSQSTFDFDKRLLTTLSHNMKQAHHVVGHYSTKFDNPYFRSRCLLTNQQDLIPGYGYQFYGDTWRMMKTTMKAKRNTLKNFIRQTTGNDEKTFVDLKYWYITHFKDHKLWKKSMDYIIDHCVKDVKMTYEGLKRAELFNNIGRAKA* |
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