Scaffold Ga0068513_1000588

Overview

Basic Information

• Taxon OID: 3300004951
• Scaffold ID: Ga0068513_1000588
• Source Dataset Name: Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3686
• Total Scaffold Genes: 10
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (70.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → unclassified viruses → Circular genetic element sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: East Sea, Korea
• Coordinates
  • Lat. (^o): 37.0
  • Long. (^o): 131.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004419	Metagenome	439	Y
F046641	Metagenome	151	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0068513_10005884	F004419	AGG	MAFYRTREGAITAADSFTALDSLYGQSTTASIQVPAGASQIVGVIATISTDSATNGAATFACQLSGDGLSNGQETFAIGSQGVDGTPASNGMTNLPMTLDVAIPCVGSNQVSVAVAMDVDVGSAQASITLVFN*
Ga0068513_10005886	F046641	GAGG	MKAMTKTAVKRKLKTMVTATKKLLDDKMSNPRSHVTMSPKDLLDLNRKFMTKLKAISK*