Scaffold Ga0070915_101851

Overview

Basic Information

• Taxon OID: 3300004817
• Scaffold ID: Ga0070915_101851
• Source Dataset Name: Hypersaline lake viral communities from Bras del Port, Santa Pola, Alicante, Spain - SAL2 dirigido Enero 2015
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Alicante
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 544
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → environmental samples → uncultured virus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Lake → Hypersaline Lake Viral Communities From Bras Del Port, Santa Pola, Alicante, Spain

Source Dataset Sampling Location

• Location Name: Spain
• Coordinates
  • Lat. (^o): 38.19317
  • Long. (^o): -0.59268
  • Depth (m): 58.6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F065465	Metagenome	127	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0070915_1018511	F065465	N/A	MSDTITVVCECDAKDEAHSMGYRRYADMAAADIVAAWPLEYASHGSWDSHILPTLRCLSGYADGGYGTYQQRQDIALIQDGDEADMPADAVVLDSGHLLDDMIDAWHSGRHQAITDTLRQSDEHSLEDIQR*