Scaffold Ga0063282_1027408

Overview

Basic Information

• Taxon OID: 3300003878
• Scaffold ID: Ga0063282_1027408
• Source Dataset Name: Plastic marine debris microbial communities from the Atlantic Ocean - SEA_0142_20120611_metagen
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Marine Biological Laboratory
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 909
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Plastic Marine Debris Microbial Communities From The Atlantic Ocean

Source Dataset Sampling Location

• Location Name: Atlantic Ocean
• Coordinates
  • Lat. (^o): 39.978
  • Long. (^o): -68.882
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003647	Metagenome / Metatranscriptome	475	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0063282_10274081	F003647	N/A	KNRASNKAFAKQTILKLDIEDYKRSLKQGTYGGITYEEAEQVLESYKTELQVWNYITELIEKQ*