Scaffold P4metv_107023

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold P4metv_107023

Scaffold P4metv_107023

Overview

Basic Information
Taxon OID	3300003629 Open in IMG/M
Scaffold ID	P4metv_107023 Open in IMG/M
Source Dataset Name	Hypersaline viral communities from Bras del Port, Santa Pola, Spain - Lo Valdivia P4
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Lifesequencing S.L.
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	807
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (66.67%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline Samples → Hypersaline Viral And Bacterial Communities From Bras Del Port, Santa Pola, Spain

Source Dataset Sampling Location
Location Name	Bras del Port, Santa Pola, Spain
Coordinates	Lat. (^o)	38.192206	Long. (^o)	-0.591865	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F098766	Metagenome	103	Y

Sequences

Protein ID	Family	RBS	Sequence
P4metv_1070233	F098766	GGA	MTHPTCAVCGREADGGDHVRVEVERVPPERPPETYYFHPRCFERAQDWEQG*

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