Scaffold FS898DNA_10596287

Overview

Basic Information

• Taxon OID: 3300003543
• Scaffold ID: FS898DNA_10596287
• Source Dataset Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS898_N3Area_DNA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3131
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (12.50%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Source Dataset Sampling Location

• Location Name: Axial seamount, northeast pacific ocean
• Coordinates
  • Lat. (^o): 45.943716
  • Long. (^o): -129.985163
  • Depth (m): 1530

Associated Families

Family	Category	Number of Sequences	3D Structure?
F004866	Metagenome	420	Y
F005243	Metagenome / Metatranscriptome	407	Y

Sequences

Protein ID	Family	RBS	Sequence
FS898DNA_105962871	F004866	GAG	MAIVQKVELKLQTSLDITMKYQIITYCFFKDILISNSDLKFLTELAKTGKIELTKFCKSLVEKQIFKSPQSARNAITKAEKKELLFKEGNNKKTIMLNKDINVQTEGVVLLDYKVLGRESKES*
FS898DNA_105962873	F005243	N/A	MSKKTNTAPLNEKDPQMSKEEMNKRREEITEFYKDNIPHLEIQADYEMLLAQIEKSRAERMQAQMFMAQQFATQKEGGVDPNSEEGKAFQEAMAQAVNPE*